Lectures

Nitrogen Use Efficiency from a Genetics Perspective

Abiotic Stress: Part I 

Abiotic Stress: Part II 

Abiotic Stress: Part III 

Nested Association Mapping: Part I

Nested Association Mapping: Part II 

Nested Association Mapping: Part III 

Application of Association Mapping Part I

Application of Association Mapping Part II

Application of Association Mapping Part III

Part I: Introduction, Bead Array and BeadChip 

Part II: Generation of Allele Specific Product 

Part III: Detection of Allele Specific Products 

Unit 1 Lectures covering introductory material, allele and genotype frequencies, diversity, and distance

Part I

Part II

Part III

Unit 2 Lectures covering genetic effects, mean, and breeding value

Part I

Part II

Part III

Part IV

Unit 3 Lectures covering variances and covariance of relatives.

Part I

Part II

Part III

Unit 4 Lectures covering heritability.

Part I

Part II

Part III

Unit 5 Lectures covering gain from selection

 Part I

 Part II

Part III

Unit 6 Lectures covering gain from indirect selection

 Part I

 Part II

Unit 7 Lectures covering gain from indirect selection using markers

 Part I

 Part II

 Part III

Introduction to Linkage Mapping Part I

Linkage Mapping Part II 

MapDisto: Input Data and Finding Groups

Mapdisto: Finding Orders

QTL Mapping: Single Marker Analysis, Interval Mapping, and Composite Interval Mapping

QTL Mapping: Multiple Interval and Multiple Trait Mapping

 For practice data that has been mapped see the Oregon Wolfe Barley web site

http://barleyworld.org/oregonwolfe

Introduction to AA and GS Series by Clay Sneller

Introduction to AA and GS: Underlying Quantitative Genetics Principles (Flash)

Intro to AA and GS: Part II

Intro to AA and GS: Part III

Intro to AA and GS: Part IV

Mixed Model Method for Association Mapping Series by Jeffrey Endelman

Mixed Model Method for Association Mapping Part I (live class recording; sorry for the background music)

Mixed Model Method for Association Mapping Part II (live class recording)

Application of Association Mapping to Crop Improvement Part 1 by Mark Sorrels

Application of Association Mapping to Crop Improvement Part 1 by Mark Sorrels

Genomic Selection in Plant Breeding by Mark Sorrels (live class recording)

Introduction to Genomic Selection Theory Series by Jean-Luc Jannink

Introduction to Genomic Selection Theory  (live class recording)

Introduction to Genomic Selection Theory and Lab (live class recording)

Genomic Selection Theory and Lab (live class recording)-December 4, 2012

Genomic Selection Theory and Lab Continued (live class recording)-December 6, 2012